Vignette 2: Dog behavioral SNPs cluster with enhancers and promoters

The files for Vignette 2 are hosted in CSC Object Storage.

Base URL:

https://a3s.fi/swift/v1/use-case-2/

To download a file, append "the file name" to the end of the base URL.

Available files:

hits_enhancer_comp_window_0.bed
hits_enhancer_comp_window_2000.bed
hits_enhancer_robust_window_0.bed
hits_enhancer_robust_window_2000.bed
hits_promoter_comp_window_0.bed
hits_promoter_comp_window_2000.bed
hits_promoter_robust_window_0.bed
hits_promoter_robust_window_2000.bed
morrill_snps_gr.csv
morrill_snps_gr.rds

Example:

https://a3s.fi/swift/v1/use-case-2/hits_enhancer_comp_window_0.bed

Direct download URLs:

https://a3s.fi/swift/v1/use-case-2/hits_enhancer_comp_window_0.bed
https://a3s.fi/swift/v1/use-case-2/hits_enhancer_comp_window_2000.bed
https://a3s.fi/swift/v1/use-case-2/hits_enhancer_robust_window_0.bed
https://a3s.fi/swift/v1/use-case-2/hits_enhancer_robust_window_2000.bed
https://a3s.fi/swift/v1/use-case-2/hits_promoter_comp_window_0.bed
https://a3s.fi/swift/v1/use-case-2/hits_promoter_comp_window_2000.bed
https://a3s.fi/swift/v1/use-case-2/hits_promoter_robust_window_0.bed
https://a3s.fi/swift/v1/use-case-2/hits_promoter_robust_window_2000.bed
https://a3s.fi/swift/v1/use-case-2/morrill_snps_gr.csv
https://a3s.fi/swift/v1/use-case-2/morrill_snps_gr.rds

The files can also be downloaded from the command line using wget. For example:

wget https://a3s.fi/swift/v1/use-case-2/hits_enhancer_comp_window_0.bed

Note:

This is an Object Storage container. Opening only the base URL will not automatically list or download the files. The desired file name must be appended to the base URL.